Zos-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 TTAA            -G         G    G         -------     C   CTAT
     CTAGGTGAAAAT  TGATATTGG ATGG TCAATCAAA       ATCTC ATG    
     ||||||||||||  ||||||||| |||| |||||||||       ||||| |||    A
     GATTCGTTTTTG  ACTATAACC TGCC AGTTAGTTT       TAGAG TAT    
TTAAG            AG         G    G         ATTCTTA     T   CATT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Zosma26g01250.1 0.0 NA NA
Zosma85g00610.1 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference