Gbi-MIR171d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 GTGGGAA      -       A        A           C  A  -  CAA       G
        ATGAGA TGAGAAG GATGTTGG GCGGTTCAATC GA GA CA   TTACAGC 
        |||||| ||||||| |||||||| ||||||||||| || || ||   ||||||| T
        TACTCT ACTTTTC CTATAACC CGCCGAGTTAG CT CT GT   AATGTCG 
TACGTCTC      C       A        G           A  -  A  -AA       G

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Gb_11021 NA NA 2 (1)
Gb_24067 NA NA 2 (1)
Gb_34487 NA NA 2 (1)
Gb_40950 NA NA 2 (1)
Gb_28344 1.0 NA NA
Gb_19024 1.5 2 NA
Gb_25709 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference