Gbi-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    A    AA  GC   A     C        G           C  A  -   CG       G
     GAAG  GA  TGA TTAAG GATGTTGG GCGGTTCAATC GA GA CAA  TTACAGT 
     ||||  ||  ||| ||||| |||||||| ||||||||||| || || |||  ||||||| T
     CTTC  TT  ATT AATTC CTATAACC CGCTGAGTTAG CT CT GTT  AATGTCG 
CCATA    GG  --   C     A        G           A  -  A   CG       A

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Gb_28344 1.5 NA NA
Gb_19024 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference