Gbi-MIR171f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    GATTC       GT      A                        AA         AAC
         GTGAGCC  TTTGTG GATATTGGCGCGGTTCAACCGGAC  CGGTATTAA   
         |||||||  |||||| ||||||||||||||||||||||||  |||||||||    
         CGTTCGG  AAACAC CTATAACCGTGCCGAGTTGGTTTG  GCCATAATT   
CCACCTCCC       --      A                        GG         GTA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Gb_10576 NA 2 2 (1)
Gb_28344 1.5 NA NA
Gb_19024 2.0 2 NA
Gb_25709 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference