Pab-MIR171a

Basic info.

• miRNA locus ID
• Pab-MIR171a

• miRNA locus accession
• PmiREN025200

• Organism
• Picea abies

• Genomic location
• Pab-CBVK0102052178.1  404  524  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TATTCTTCTG  T    ------------   C            C       T  AG   TT      GG
          GG GCAA            AGG GATATTGACGTG CTCAATT GA  ACA  GTTAGA  
          || ||||            ||| |||||||||||| ||||||| ||  |||  ||||||  A
          TC CGTT            TCC CTATAACTGCGC GAGTTAG CT  TGT  CGATCT  
         T  -    TTCTTTTTCTCT   C            C       T  CG   CT      TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference