Pab-MIR171c

Basic info.

• miRNA locus ID
• Pab-MIR171c

• miRNA locus accession
• PmiREN025202

• Organism
• Picea abies

• Genomic location
• Pab-CBVK0100543432.1  15341  15461  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

GTATTTAC     -C    --  A        A         C A       TT    AAAA
        CGAGC  GTCT  TG GATATTGG GCGGTTCAA C GACAACA  ATTA    
        |||||  ||||  || |||||||| ||||||||| | |||||||  ||||    G
        GTTCG  CAGA  AC CTATAACC TGCCGAGTT G TTGTTGT  TAAT    
 CTACCTT     TT    TC  G        G         T C       TT    GTAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference