Tae-MIR171m

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
AGAGA    -     G     -C        T             C     GA  AC
     GAAG AAGAA ACATG  TGGTATTG TTCGGCTCATATC TCGTC  GC  
     |||| ||||| |||||  |||||||| ||||||||||||| |||||  ||  A
     CTTC TTCTT TGTAC  ACTATAAC AAGCCGAGTGTAG AGTAG  TG  
AGAGA    C     A     TC        C             -     GC  CT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Traes_5AS_3858BC13A.2 NA NA 2 (1)
TraesCS4A02G088500.1 0.0 NA NA
TraesCS4B02G215700.1 0.0 NA NA
TraesCS4D02G216200.1 0.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference