Tae-MIR171t

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
ACC      GG   T   --    --                   A   A  T  T     AGGA
   TGCGAG  GAG GAA  CGCG  GTATTGGTGCGGTTCAATC GAG GC GG GCCCC    
   ||||||  ||| |||  ||||  ||||||||||||||||||| ||| || || |||||    G
   ACGCTC  TTC CTT  GCGC  TATAACCGTGCCGAGTTAG TTC CG CC TGGGG    
  T      AG   T   TG    AC                   C   C  -  T     AACA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

TraesCS4B02G367300.1 1.0 NA NA
TraesCS4D02G062300.1 1.0 NA NA
TraesCS4D02G360200.1 1.0 NA NA
TraesCS5A02G535000.1 1.0 NA NA
TraesCS4A02G482000.1 1.5 NA NA
TraesCS6A02G247200.1 1.5 NA NA
TraesCS6B02G277400.1 1.5 NA NA
TraesCS6D02G229400.1 1.5 NA NA
TraesCS7A02G014200.1 1.5 NA NA
TraesCS7D02G011400.1 1.5 NA NA
TraesCS4A02G088500.1 2.0 NA NA
TraesCS4B02G215700.1 2.0 NA NA
TraesCS4D02G216200.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference