Csa-MIR171a

Basic info.

• miRNA locus ID
• Csa-MIR171a

• miRNA locus accession
• PmiREN027820

• Organism
• Camelina sativa

• Genomic location
• Csa-5  32631633  32631745  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

 TTT     -C  T    TG             A      T  AT        TCCT
    TGCAA  CC TGAA  TGTTTGTTGATGG CATCTA GC  ATCGGTCA    
    |||||  || ||||  ||||||||||||| |||||| ||  ||||||||    C
    ACGTT  GG GCTT  GCAAACAACTACC GTAGAT TG  TAGCTAGT    
CGCT     TT  T    TT             A      T  CT        TGTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference