Csi-MIR171b

Basic info.

• miRNA locus ID
• Csi-MIR171b

• miRNA locus accession
• PmiREN028039

• Organism
• Camellia sinensis

• Genomic location
• Csi-NW_021024807.1  136803  136923  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

 ATAAATAAAGTA    -    A                   CT        T     AAG
             ACAA TACG GATGTTGGTGCGGTTCAAT  GAAAGTAG ACTCT   
             |||| |||| |||||||||||||||||||  |||||||| |||||   A
             TGTT GTGC CTATAACCGTGCCGAGTTA  TTTTTATC TGAGG   
ACGCTAGTAGATC    C    A                   AT        T     ATA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference