Cam-MIR171a

Basic info.

• miRNA locus ID
• Cam-MIR171a

• miRNA locus accession
• PmiREN028393

• Organism
• Cenchrus americanus

• Genomic location
• Cam-CM007984.2  52480434  52480574  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TGAA    -  -  -C    T     T           C      ATGCTC    CAGTTGATCATGAACATGAGC
    TGCA GC TC  GAAC TGTTT GTTGGTGGTCA CTAACC      CGAT                     
    |||| || ||  |||| ||||| ||||||||||| ||||||      ||||                      
    ACGT CG AG  CTTG ACAAA CGACTACCAGT GATTGG      CACG                     
 TAA    A  G  TA    T     -           A      ------    TACACGTGTGCTAGCACTACT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference