Cre-MIR171a

Basic info.

• miRNA locus ID
• Cre-MIR171a

• miRNA locus accession
• PmiREN028816

• Organism
• Cicer reticulatum

• Genomic location
• Cre-Cr_LG1_v2  6275499  6275620  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  CACCGTCTTAATTGG     A                       -    CGT      TGA
                 GTATG GATATTGGTACGGTTCAATCAAA AGGA   GTTTTA   
                 ||||| ||||||||||||||||||||||| ||||   ||||||    
                 TATAC CTATAACCGTGCCGAGTTAGTTT TTCT   CGAAAT   
ATCTTTATATCTGTCAA     A                       A    -TT      CTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference