Cre-MIR171a

Basic info.

• miRNA locus ID
• Cre-MIR171a

• miRNA locus accession
• PmiREN028922

• Organism
• Citrus reticulata

• Genomic location
• Cre-scaffold85914_cov76  143393  143512  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TTT    --A   T     T  C        T             TTTCTTT    TCCGG
   GTGC   GCT TGAAT TG TTGTTGAT GTCATCTAATCAT       TTCA     
   ||||   ||| ||||| || |||||||| |||||||||||||       ||||      
   TACG   TGG ACTTA AC AACAACTA CAGTAGATTGGTA       AAGT     
ACG    GTA   T     T  A        C             TATTAGT    TTACG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference