Eco-MIR171a

Basic info.

• miRNA locus ID
• Eco-MIR171a

• miRNA locus accession
• PmiREN029322

• Organism
• Eleusine coracana

• Genomic location
• Eco-LXGH01142635.1  40464  40606  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

AT   -   -   --C     T     T               AA     GCT   GTTAATCGGTGCATGCATGG
  GCT GCA GCT   TGAAC TGTTT GTTGGTGGTCATCTA  CACGC   CCG                    
  ||| ||| |||   ||||| ||||| |||||||||||||||  |||||   |||                    A
  CGA CGT CGG   GCTTG ACAAA CGACTACCAGTAGAT  GTGTG   CGT                    
     A   A   ACT     T     -               TG     ---   ACTAGTGCCTGTAGATTGTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference