Hvu-MIR171a

Basic info.

• miRNA locus ID
• Hvu-MIR171a

• miRNA locus accession
• PmiREN029932

• Organism
• Hordeum vulgare

• Genomic location
• Hvu-SDOW01001462.1  134605  134778  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TTC     - -   -     T     T      T                  TT  A   G      -   GCATGCATGGATGGACGCCT
   ATGCA G CTC TGAAC TGTTT GTTGGT GTCATCTAACCATCATCG  CC TCT CCATCC GGT                    
   ||||| | ||| ||||| ||||| |||||| ||||||||||||||||||  || ||| |||||| |||                    G
   TGCGT C GAG ACTTG ACAAA CGACTA CAGTAGATTGGTAGTAGT  GG AGA TACGCA CCG                    
 CC     A A   C     T     -      C                  --  C   -      G   CATCAGCGGTGCGTGAGTGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference