Hlu-MIR171a

Basic info.

• miRNA locus ID
• Hlu-MIR171a

• miRNA locus accession
• PmiREN030118

• Organism
• Humulus lupulus

• Genomic location
• Hlu-003611F  110615  110742  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATGTAATGAAGAAAA     C          A            GC      --      AAAT
                 GAGAG GATGTTGGCA GGTTCAATCTGA  ATGGAT  TTATGC    
                 ||||| |||||||||| ||||||||||||  ||||||  ||||||    A
                 CTTTC CTATAACCGT CCGAGTTAGACT  TACCTA  GATACG    
NNNNNNNNNNNNAAAAC     A          G            -A      TG      GGAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference