Jre-MIR171a

Basic info.

• miRNA locus ID
• Jre-MIR171a

• miRNA locus accession
• PmiREN030297

• Organism
• Juglans regia

• Genomic location
• Jre-Chr12  25105815  25105932  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TTGTGCAGC       A             T          ATCTC   -      GG
           CATGGAT TGTTTGTTGATGG CATCTAATCA     TTA ATGTTT  
           ||||||| ||||||||||||| ||||||||||     ||| ||||||  C
           GTACCTA ACAAGCAACTACC GTAGATTGGT     AGT TACAAG  
TGCGTTATATA       C             C          AATAC   A      TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference