Mdo-MIR171b

Basic info.

• miRNA locus ID
• Mdo-MIR171b

• miRNA locus accession
• PmiREN030516

• Organism
• Malus domestica

• Genomic location
• Mdo-MDC008623.473  2704  2828  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   GGATT    T    TTGA   G         C         A     A A T    TCAAA
        GGGA CAGT    ACG GATATTGGT CGGTTCAAT AGAAA C G GCTC     
        |||| ||||    ||| ||||||||| ||||||||| ||||| | | ||||     G
        TCCT GTCA    TGC CTATAACCG GCCGAGTTA TTTTT G C CGAG     
TACTATTC    T    -CTG   A         T         G     C G T    TTCGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference