Pno-MIR171a

Basic info.

• miRNA locus ID
• Pno-MIR171a

• miRNA locus accession
• PmiREN031378

• Organism
• Panax notoginseng

• Genomic location
• Pno-CM024994.1  37960565  37960684  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  AGTAGAAAATGAAGAA    G                       --  C T       AA
                  TACG GATGTTGGTGCGGTTCAATTAGA  GC G GCTCTAC  
                  |||| |||||||||||||||||||||||  || | |||||||   
                  ATGC CTATAACCGTGCCGAGTTAGTTT  TG C CGAGATG  
CATCATCAATATATTTGG    A                       TT  T T       TG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference