Pno-MIR171c

Basic info.

• miRNA locus ID
• Pno-MIR171c

• miRNA locus accession
• PmiREN031380

• Organism
• Panax notoginseng

• Genomic location
• Pno-CM024998.1  107717099  107717224  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  CAGATATGAT       A     T          C         CT  -    T  TTTTCCT
            GATGAAT TGTTT GTTGATGGTC TCTAATCAT  TT TTCT CA       
            ||||||| ||||| |||||||||| |||||||||  || |||| ||        
            CTACTTA ACAAA CGACTACTAG AGATTGGTA  AA AAGA GT       
AGTTACACCTCA       C     -          T         TT  T    C  CTTTCAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference