Pdu-MIR171b

Basic info.

• miRNA locus ID
• Pdu-MIR171b

• miRNA locus accession
• PmiREN031925

• Organism
• Prunus dulcis

• Genomic location
• Pdu-pdulcis26_s0060  477554  477679  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GGTTTGCAGCAG     A        T           C     C  CT   -     TT GT
              TGAAT TGTTTGTT ATGGTCATCTA TTATT TG  TCA ATATT  T  
              ||||| |||||||| ||||||||||| ||||| ||  ||| |||||  |  A
              ACTTA ACAAACAA TACCAGTAGAT AGTAA AC  AGT TATAA  A  
TATATCTATATAGT     C        C           T     T  --   A     TT AC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference