Smi-MIR171a

Basic info.

• miRNA locus ID
• Smi-MIR171a

• miRNA locus accession
• PmiREN032226

• Organism
• Salvia miltiorrhiza

• Genomic location
• Smi-scaffold1636_11  2036  2148  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TTTCT    CAA     C  A         C           TCTTCCTCATC     AAC
       GCTG   CGAAT TG TTGTTGATG TCATCTAATCA           GAAAC   
       ||||   ||||| || ||||||||| |||||||||||           |||||    
       CGGC   GCTTG AC AACAACTAC AGTAGATTGGT           TTTTG   
GATCGAT    AAC     T  A         T           -----------     CTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference