Tha-MIR171c

Basic info.

• miRNA locus ID
• Tha-MIR171c

• miRNA locus accession
• PmiREN032408

• Organism
• Tarenaya hassleriana

• Genomic location
• Tha-NW_010965019.1  1968613  1968735  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

GGA       CGAA    -----  A                    AC  C    T    CAAAC
   CGATGGA    GATA     CG GATATTGGTGCGGTTCAATC  AC GTTG ACTC     
   |||||||    ||||     || ||||||||||||||||||||  || |||| ||||     T
   GCTACCT    CTAT     GC CTATAACCGTGCCGAGTTAG  TG TAGC TGGG     
          AATG    AGTAA  A                    CT  T    T    AAACA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference