Dca-MIR171a

Basic info.

• miRNA locus ID
• Dca-MIR171a

• miRNA locus accession
• PmiREN034241

• Organism
• Daucus carota

• Genomic location
• Dca-7  5373728  5373854  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATTT  C   T      T                    AA   --     -     --     TG
      TG ATA ATGGAT TGTTTGTTGATGGTCATCTA  CAT  TTTTT CGGGT  TTTCG  
      || ||| |||||| ||||||||||||||||||||  |||  ||||| |||||  |||||   
      AC TAT TACTTG ACAAACGACTACTAGTAGAT  GTA  AAGGA GTCCG  GAAGT  
ACTTAT  C   C      C                    TG   TT     T     TC     TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference