Gma-MIR171b

Basic info.

• miRNA locus ID
• Gma-MIR171b

• miRNA locus accession
• PmiREN043103

• Organism
• Glycine max-Zhang_Chun_Man_Cang_Jin

• Genomic location
• Gma-Gm12  8464040  8464162  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

     -      -ACC     AACGG         C         A        AT        T
   TA GAGGGG    GGTTC     GATATTGGT CGGTTCAAT AGAAAGCA  GCTCAAAA 
   || ||||||    |||||     ||||||||| ||||||||| ||||||||  |||||||| G
   AT CTTCTC    CCAAG     CTATAACCG GCCGAGTTA TTTTTTGT  TGGGTTTT 
CCC  A      GTCA     ---CA         T         C        CC        T

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference