Gso-MIR171a

Basic info.

• miRNA locus ID
• Gso-MIR171a

• miRNA locus accession
• PmiREN044779

• Organism
• Glycine soja-PI_562565

• Genomic location
• Gso-glyso.W05.gnm1.Chr06  46905035  46905159  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

      -       CCG   CAA  G         C         A        AT      AAT
   GTA GAGGGGA   GTT   CG GATATTGGT CGGTTCAAT AGAAAGCA  GCTCAA   
   ||| |||||||   |||   || ||||||||| ||||||||| ||||||||  ||||||   G
   CGT CTTCTCT   CAA   GC CTATAACCG GCCGAGTTA TTTTTTGT  TGGGTT   
CCC   T       TCA   --A  A         T         C        CC      ATT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference