Pca-MIR171b

Basic info.

• miRNA locus ID
• Pca-MIR171b

• miRNA locus accession
• PmiREN045537

• Organism
• Pogostemon cablin

• Genomic location
• Pca-QKXD01002241.1  36323  36421  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TTTCT        -    T  CA                     T   AA
       GAGAAGTA GACA GG  TGATATTGGTTCGGCTCACCT CTT  
       |||||||| |||| ||  ||||||||||||||||||||| |||   
       CTTTTTAT CTGT TC  ACTATAACCAAGCCGAGTGGA GAG  
TAAAAGT        T    -  TC                     -   CA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference