Scu-MIR171a

Basic info.

• miRNA locus ID
• Scu-MIR171a

• miRNA locus accession
• PmiREN045782

• Organism
• Salvinia cucullata

• Genomic location
• Scu-Sacu_v1.1_s0004  918927  919048  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TAATAATT      AATT                        T     GA   --    AA
          CAAGAG    GGTGTGATGTTGGCTTGGTTCAAC TGATT  AAT  TTCA  
          ||||||    |||||||||||||||||||||||| |||||  |||  ||||   
          GTTCTT    CCACACTGTAACCGAGCCGAGTTG ACTAG  TTA  AAGT  
GTTTCTTCTT      ACTT                        T     AA   CA    AC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference