Zju-MIR171c

Basic info.

• miRNA locus ID
• Zju-MIR171c

• miRNA locus accession
• PmiREN046273

• Organism
• Ziziphus jujuba

• Genomic location
• Zju-NC_029682.1  5731366  5731484  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  AATTTGCAAC       A                         TC  --TT     ATT
            CATGGAT TGTTTGTTGATGGTCATCTAATTAT  TG    TCAAT   
            ||||||| |||||||||||||||||||||||||  ||    |||||   A
            GTACTTG ACAAGCAACTACCGGTAGATTAGTA  AC    AGTTA   
TACATACATATA       C                         TT  CTCT     ATA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference