Bra-MIR2111d

Basic info.

• miRNA locus ID
• Bra-MIR2111d

• miRNA locus accession
• PmiREN002490

• Organism
• Brassica rapa

• Genomic location
• Bra-A10  19725542  19725666  -

• Comments
• A member of family MIR2111

• Confidence level
• 

Secondary strurture and sequence

 GATA    -        CT         CA        T       C    --AG   TGTAAA
     CTTG GTGAGGAA  GGTAATCTG  TCCTGAGG TTAAAAA TCAT    ACA      
     |||| ||||||||  |||||||||  |||||||| ||||||| ||||    |||       
     GAGC CATTCCTT  CCATTAGAC  AGGGCTCC AATTTTT AGTA    TGT      
ACATG    T        CT         AC        T       -    CATA   TAAACG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference