Bra-MIR390f

Basic info.

• miRNA locus ID
• Bra-MIR390f

• miRNA locus accession
• PmiREN002507

• Organism
• Brassica rapa

• Genomic location
• Bra-A10  11457531  11457654  +

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

   GT    G     T      AA         G            G  ----   TCAC   TAC
     AGTA AGAAG AGCTGT  AGCTCAGGA GGATAGCGCCAT AC    GCA    CAT   
     |||| ||||| ||||||  ||||||||| |||||||||||| ||    |||    |||    
     TCGT TCTTC TCGGTA  TTGAGTCCT CCTATCGCGGTA TG    TGT    GTA   
TATTT    -     T      CC         A            A  TATA   TTCT   TAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference