Cru-MIR159b

Basic info.

• miRNA locus ID
• Cru-MIR159b

• miRNA locus accession
• PmiREN002747

• Organism
• Capsella rubella

• Genomic location
• Cru-scaffold_2  11281838  11282056  -

• Comments
• A member of family MIR159

• Confidence level
• 

Secondary strurture and sequence

     -CAAA     TG   G            GA        C      -TT    ------      AGA      G  A  C    G TC     -    CT       GTTAA
   AG     AAAGA  AGA GTAGAGCTCCTT  AGTTCAAA GAGAGT   AGCA      GGGTAG   AAAGCT CT AG TATG A  CCATA AGCC  AATCCTT     
   ||     |||||  ||| ||||||||||||  |||||||| ||||||   ||||      ||||||   |||||| || || |||| |  ||||| ||||  |||||||      
   TC     TTTCT  TCT CATCTCGAGGGA  TTAGGTTT TTCTCA   TCGT      CCCGTT   TTTCGA GA TC ATAC T  GGTAT TTGG  TTAGGAA     
CTC  TTCAG     --   A            AG        C      TTT    TAATTT      CAA      G  C  T    G TC     A    -T       ATAGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference