Esa-MIR162b

Basic info.

• miRNA locus ID
• Esa-MIR162b

• miRNA locus accession
• PmiREN005604

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_6  2732097  2732235  -

• Comments
• A member of family MIR162

• Confidence level
• 

Secondary strurture and sequence

       T  T  TT    T       G    C    C       A    C  AGAAATTTT          TGGAC
    TGA GA AG  GAAG CGCTGGA GCAG GGTT ATCGATC ATTC TG         CTTTCGATGT     
    ||| || ||  |||| ||||||| |||| |||| ||||||| |||| ||         ||||||||||      
    ACT CT TC  CTTC GCGACCT CGTC CCAA TAGCTAG TAAG AC         GAAAGCTACA     
GTTT   C  -  CT    -       A    T    A       C    T  ---------          TTTCA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference