Esa-MIR166c

Basic info.

• miRNA locus ID
• Esa-MIR166c

• miRNA locus accession
• PmiREN005611

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_14  2294318  2294494  +

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

  GAAGCTTTTTCCTT            TT      CA   G C C     T  GATCTAC          A   A      TCGCTGCTC
                TTGAGGGGAATG  GTCTGG  CGA G C TTAAC CA       AATTGATTAT TAT TATATA         
                ||||||||||||  ||||||  ||| | | ||||| ||       |||||||||| ||| ||||||         A
                AACTCCCCTTAC  CGGACC  GCT C G AATTG GT       TTAGCTAGTA GTA ATATAT         
CTAGCTTCGTTACATT            TT      AG   G A T     -  ---ATAT          A   C      TTACCAATA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference