Esa-MIR166f

Basic info.

• miRNA locus ID
• Esa-MIR166f

• miRNA locus accession
• PmiREN005614

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_2  2892571  2892703  +

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

  CCTTTGGTCTAG     A A      TT      A      -    GA  --AAA     CG  CAA
              GGTTG G GGAATG  GTCTGG TCGAGA TCAT  AG     TCATT  AT   
              ||||| | ||||||  |||||| |||||| ||||  ||     |||||  ||    
              CCAAC C CCTTAC  CGGACC GGCTCT AGTA  TC     AGTAA  TG   
CACTAGTATAATAG     C C      TT      A      T    AA  CCAAA     AA  TAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 3398
• Chromosome: Esa-scaffold_2
• Cluster start: 2890642
• Cluster end: 2892703

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference