Esa-MIR172b

Basic info.

• miRNA locus ID
• Esa-MIR172b

• miRNA locus accession
• PmiREN005635

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_2  8433222  8433365  +

• Comments
• A member of family MIR172

• Confidence level
• 

Secondary strurture and sequence

   CAG    AT   T    T       C     C       C  TT   -AA  AAC     -     A A  GA
      AGCC  GTA TTGC GATGCAG ATCAT AAGATTC CA  CGA   GG   CCTTT TTTTC G CT  
      ||||  ||| |||| ||||||| ||||| ||||||| ||  |||   ||   ||||| ||||| | ||   
      TCGG  CAT AACG CTACGTC TAGTA TTCTAAG GT  GCT   CC   GGAAA AAAAG C GG  
CGATTG    -C   C    T       A     A       T  TC   ACA  AAA     C     - -  AG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference