Esa-MIR394a

Basic info.

• miRNA locus ID
• Esa-MIR394a

• miRNA locus accession
• PmiREN005644

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_5  8491404  8491546  -

• Comments
• A member of family MIR394

• Confidence level
• 

Secondary strurture and sequence

     T    T      T   -      TTC   C           A  T     -       - C      CC
 AGAG TTCT ACAGAT TCT TTGGCA   TGT CACCTCCTTCT TG AAATA AGTGTAT C TGTATA  
 |||| |||| |||||| ||| ||||||   ||| ||||||||||| || ||||| ||||||| | ||||||   
 TCTT GGGA TGTCTA AGA AACCGT   ACG GTGGAGGGAGA AT TTTGT TTATGTA G ATATAT  
T    T    T      C   T      CAT   T           A  -     G       T T      GT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference