Pha-MIR167b

Basic info.

• miRNA locus ID
• Pha-MIR167b

• miRNA locus accession
• PmiREN016213

• Organism
• Panicum hallii

• Genomic location
• Pha-Chr03  56122640  56122795  +

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

CAA      ----       T      A    C  -            TTT    G   -----T    -    C  A A   AC
   ATGCTC    GTGTGAA GAGTGA GCTG CA GCATGATCTAGC   GATT GCA      CATC GGCC AC C GTC  
   ||||||    ||||||| |||||| |||| || ||||||||||||   |||| |||      |||| |||| || | |||   
   TACGAG    CACACTT TTTACT CGAC GT CGTACTAGATTG   CTAA CGT      GTGG CCGG TG G TAG  
  G      TTGT       C      C    A  A            TTT    A   CCATAT    T    T  - C   AC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 3954
• Chromosome: Pha-Chr03
• Cluster start: 56122640
• Cluster end: 56124600

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference