Pha-MIR167f

Basic info.

• miRNA locus ID
• Pha-MIR167f

• miRNA locus accession
• PmiREN016217

• Organism
• Panicum hallii

• Genomic location
• Pha-Chr03  56124431  56124600  +

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

 AGCG    -     A   T           C           A   T   ATAGATGATACA     A      T      --   - CA
     GTGC TCCAC AGT GGTGAAGCTGC AGCATGATCTG CGG ATG            CTTTT CCTCTC CCCTGA  TTG C  
     |||| ||||| ||| ||||||||||| ||||||||||| ||| |||            ||||| |||||| ||||||  ||| |   
     CACG GGGTG TCG CTACTTTGATG TCGTACTGGAC GTC TAC            GAGAA GGGGAG GGGACT  AGC G  
AGCTA    T     G   T           -           -   -   ----GGAAAAAG     A      T      TA   A GA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 3954
• Chromosome: Pha-Chr03
• Cluster start: 56122640
• Cluster end: 56124600

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference