Pha-MIR169g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
       AT      CC AT   C        A     A      T   - G    A  TG        --    G
    GTG  GAAGAG  T  CTC CTTAGCCA GAATG CTTGCC ATC T TACT TC  GTTCATCA  GGGA 
    |||  ||||||  |  ||| |||||||| ||||| |||||| ||| | |||| ||  ||||||||  |||| T
    CAC  CTTCTC  A  GAG GAATTGGT CTTAC GAACGG TAG A GTGG AG  TAGGTAGT  TCCT 
GTAC   --      TT GT   C        -     -      -   T G    A  -G        AT    A

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Pha-MIR169g ,   Pha-MIR169h PmiREN016227, PmiREN016228 Pha-Chr03 - 3561253 3568048

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.4G312900.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference