Sit-MIR156g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
     C   G  -T   -A    T      -             A      GGTT          AG
 GGAG TGG TT  TGA  GGTT GACAGA AGAGAGTGAGCAC CGCGGT    TCTTAGCATG  
 |||| ||| ||  |||  |||| |||||| ||||||||||||| ||||||    ||||||||||  T
 TCTC ACC GA  ACT  CCGA CTGTCT TCTCTCACTCGTG GTGTCG    AGGGTCGTAC  
T    T   G  CT   CA    -      A             C      ----          CG

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Sit-MIR156f ,   Sit-MIR156g PmiREN018616, PmiREN018617 Sit-scaffold_5 + 11531652 11532174

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.1G069300.1 1.0 1 NA
Seita.1G091900.1 1.0 NA NA
Seita.2G254300.1 1.0 NA NA
Seita.2G266500.1 1.0 NA NA
Seita.2G324900.1 1.0 1 NA
Seita.2G325000.1 1.0 1 NA
Seita.4G270400.1 1.0 NA NA
Seita.5G432500.1 1.0 NA NA
Seita.6G205500.1 1.0 NA NA
Seita.6G223300.1 1.0 NA NA
Seita.7G190000.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference