Sit-MIR166b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
          T G  TA              TT      C    T            G TC   TGATATCTTC
     ATGCT G AT  GGTTAAGGGGGTTG  GTCTGG TCGG GTCTCCGGTCGG A  GAT          
     ||||| | ||  ||||||||||||||  |||||| |||| |||||||||||| |  |||          C
     TACGG C TA  CCAATTTCCCTAAC  CGGACC GGCT TAGAGGCCAGCT T  GAG          
TTGCT     - G  --              TT      A    T            G -C   GCCGTTCCGG

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Sit-MIR166a ,   Sit-MIR166b PmiREN018634, PmiREN018635 Sit-scaffold_1 - 39203068 39203436

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.9G529300.1 1.0 NA NA
Seita.3G395000.1 2.0 NA NA
Seita.5G141300.1 2.0 NA NA
Seita.6G149100.1 2.0 NA NA
Seita.9G158800.1 2.0 NA NA
Seita.9G219700.1 2.0 NA NA
Seita.9G572600.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference