Spo-MIR156a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
G   GA     ---A     C        -A    -         A   --   A  A      AA
 GGG  GGGGG    TGGGG GCTGACAG  AGAG AGTGAGCAC CAC  CGG GG GGTATT  
 |||  |||||    ||||| ||||||||  |||| ||||||||| |||  ||| || ||||||   
 CCC  CCCCC    GCCCC CGGCTGTC  TCTC TCACTCGTG GTG  GCC CT CCGTAG  
A   AA     GTTG     -        CC    C         C   CC   G  A      GA

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Spo-MIR156a ,   Spo-MIR156b PmiREN020137, PmiREN020138 Spo-pseudo0 + 7606866 7610083

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Spipo10G0020600 1.0 1 NA
Spipo12G0064300 1.0 1 NA
Spipo13G0025100 1.0 1 NA
Spipo1G0082600 1.0 1 NA
Spipo4G0054600 1.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference