Spo-MIR167b

Basic info.

• miRNA locus ID
• Spo-MIR167b

• miRNA locus accession
• PmiREN020149

• Organism
• Spirodela polyrhiza

• Genomic location
• Spo-pseudo2  1601957  1602079  +

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

 CTC     -A    A                 G          -   G   TCCACC    GC
    GGTGC  CCAT AGTGGGTGAAGCTGCCA CATGATCTGA GCA CCC      GGAG  
    |||||  |||| ||||||||||||||||| |||||||||| ||| |||      ||||   
    CCACG  GGTA TCGCCTACTTTGACGGT GTACTAGACT CGT GGG      CCTC  
CTCA     GG    A                 -          A   A   -TACTC    CT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 4179
• Chromosome: Spo-pseudo2
• Cluster start: 1597363
• Cluster end: 1602079

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference