Aly-MIR391

Basic info.

• miRNA locus ID
• Aly-MIR391

• miRNA locus accession
• PmiREN000500

• Organism
• Arabidopsis lyrata

• Genomic location
• Aly-scaffold_8  19524565  19524676  +

• Comments
• A member of family MIR391

• Confidence level
• 

Secondary strurture and sequence

 AAC    -AACA   AT     T  C          G  C      -----CT    T
    TGCA     AAG  TTGCT CG AGGAGAGATA CG CACCAC       CTTC 
    ||||     |||  ||||| || |||||||||| || ||||||       |||| A
    ACGT     TTC  AACGA GC TCCTCTCTAT GC GTGGTG       GAAG 
ATCT    ATATA   CT     T  A          G  A      ACCAATT    A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• Link To miRbase
• Link To PNDB

Reference

• No reference