Aly-MIR403a

Basic info.

• miRNA locus ID
• Aly-MIR403a

• miRNA locus accession
• PmiREN000523

• Organism
• Arabidopsis lyrata

• Genomic location
• Aly-scaffold_4  22991764  22991898  +

• Comments
• A member of family MIR403

• Confidence level
• 

Secondary strurture and sequence

  ATTA      T  T     AT    T        C             G TTAT     A     TTT
      GAAGAG CG ATTAC  GTTT GTGCGTGA TCTAATTTAACAG C    GTTTG GATTT   
      |||||| || |||||  |||| |||||||| ||||||||||||| |    ||||| |||||   T
      CTTTTC GT TAATG  CAAA CACGCACT AGATTAGGTTGTC G    TAGGC CTAAA   
TTTTAG      T  C     CT    -        T             - -TTT     -     CAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• Link To miRbase
• Link To PNDB

Reference

• No reference