Ath-MIR166d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GCTTTGGTTTAG     A A     ATT      C      -    GA  AA    GGTAGATTGATTC
              GGTTG G GGAAT   GTCTGG TCGAGG TCAT  AG  GATC             
              ||||| | |||||   |||||| |||||| ||||  ||  ||||             A
              CCAAC C CCTTA   CGGACC GGCTCT AGTA  TC  CTAA             
CTTACACTATACAG     C C     CTT      A      T    AA  -C    AGTGAGAAATTTT

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Ath-MIR166c ,   Ath-MIR166d PmiREN000664, PmiREN000665 Ath-Chr5 + 2838632 2840748

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

AT1G52150.2 0.5 NA NA
AT1G30490.1 1.0 NA NA
AT2G34710.1 1.0 NA NA
AT4G32880.1 1.0 NA NA
AT5G60690.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference