Bna-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  ACTAACATAAAGACAATA  A                       -     ACA    TTTG
                    CG GATATTGGTGCGGTTCAATCAGA AAACC   CTCT    
                    || ||||||||||||||||||||||| |||||   ||||     
                    GC CTATAACCGTGCCGAGTTAGTTT TTTGG   GAGA    
ACCACCTCCGGTTAGTGTGA  A                       G     CTA    TGTT

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Bna-MIR171e ,   Bna-MIR171k PmiREN001990, PmiREN001996 Bna-NC_027757.2 - 28165017 28168490

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_013797403.2 1.5 NA NA
XM_013830007.2 1.5 NA NA
XM_013832628.2 1.5 NA NA
XM_013841612.2 1.5 NA NA
XM_013852286.2 1.5 NA NA
XM_013872928.2 1.5 NA NA
XM_013879337.2 1.5 NA NA
XM_013881692.2 1.5 NA NA
XM_022718497.1 1.5 NA NA
XR_002663632.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference