Bra-MIR390c

Basic info.

• miRNA locus ID
• Bra-MIR390c

• miRNA locus accession
• PmiREN002504

• Organism
• Brassica rapa

• Genomic location
• Bra-A02  5742201  5742324  -

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

    --TA      T    CTAA         G            AACTCGGTCAATTA       TAC
ATAG    GAGAAG AGCT    AGCTCAGGA GGATAGCGCCAT              GTATACA   
||||    |||||| ||||    ||||||||| ||||||||||||              |||||||    
TATT    TTCTTC TCGG    TTGAGTCCT CCTATCGCGGTA              TATATGT   
    TTCG      T    TACC         A            ------------AA       TTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference