Esa-MIR168d

Basic info.

• miRNA locus ID
• Esa-MIR168d

• miRNA locus accession
• PmiREN005624

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_1  14140536  14140676  -

• Comments
• A member of family MIR168

• Confidence level
• 

Secondary strurture and sequence

 A       T  -     GT     C      C         A  G T      -A     -   CT   ACTT
  TTCACTG CG GGCTC  ATTCG TTGATG AGGTCGGGA TC A TGGCTG  CACGA CCA  CGA    
  ||||||| || |||||  ||||| |||||| ||||||||| || | ||||||  ||||| |||  |||     
  AAGTGGT GC CCGAG  TAAGT AACTAC TTCAGCCCT AG T ACTGAT  GTGTT GGT  GTT    
AA       C  T     GC     C      -         -  G T      GA     T   -T   CCTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 3396
• Chromosome: Esa-scaffold_1
• Cluster start: 14140536
• Cluster end: 14148166

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference